Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Dnmt3aO88508 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Dnmt3aO88508 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Dnmt3aO88508 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Dnmt3aO88508 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.82□□□□□ -0.04
Dnmt3aO88508 Gm4995-201ENSMUST00000117247 432 ntBASIC14.82□□□□□ -0.04
Dnmt3aO88508 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.82□□□□□ -0.04
Dnmt3aO88508 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.82□□□□□ -0.04
Dnmt3aO88508 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.82□□□□□ -0.04
Dnmt3aO88508 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.82□□□□□ -0.04
Dnmt3aO88508 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.82□□□□□ -0.04
Dnmt3aO88508 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.82□□□□□ -0.04
Dnmt3aO88508 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.82□□□□□ -0.04
Dnmt3aO88508 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Dnmt3aO88508 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.81□□□□□ -0.04
Dnmt3aO88508 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Gm25911-201ENSMUST00000157621 56 ntBASIC14.81□□□□□ -0.04
Dnmt3aO88508 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.81□□□□□ -0.04
Dnmt3aO88508 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.81□□□□□ -0.04
Dnmt3aO88508 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Dnmt3aO88508 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Gm15427-201ENSMUST00000117288 531 ntBASIC14.8□□□□□ -0.04
Dnmt3aO88508 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.8□□□□□ -0.04
Dnmt3aO88508 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.8□□□□□ -0.04
Dnmt3aO88508 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.8□□□□□ -0.04
Dnmt3aO88508 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.8□□□□□ -0.04
Dnmt3aO88508 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Dnmt3aO88508 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3aO88508 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3aO88508 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Dnmt3aO88508 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3aO88508 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3aO88508 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Dnmt3aO88508 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms