Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Tnnt1O88346 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Tnnt1O88346 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.82■□□□□ 0.6
Tnnt1O88346 Gm27321-201ENSMUST00000185021 205 ntBASIC18.82■□□□□ 0.6
Tnnt1O88346 Mir7023-201ENSMUST00000185093 64 ntBASIC18.82■□□□□ 0.6
Tnnt1O88346 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnnt1O88346 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tnnt1O88346 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnnt1O88346 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnnt1O88346 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnnt1O88346 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Tnnt1O88346 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnnt1O88346 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnnt1O88346 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnnt1O88346 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnnt1O88346 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.81■□□□□ 0.6
Tnnt1O88346 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tnnt1O88346 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.81■□□□□ 0.6
Tnnt1O88346 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Tnnt1O88346 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.81■□□□□ 0.6
Tnnt1O88346 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.81■□□□□ 0.6
Tnnt1O88346 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnnt1O88346 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.8■□□□□ 0.6
Tnnt1O88346 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Gm18049-201ENSMUST00000208909 581 ntBASIC18.8■□□□□ 0.6
Tnnt1O88346 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.8■□□□□ 0.6
Tnnt1O88346 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tnnt1O88346 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
Tnnt1O88346 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnnt1O88346 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Tnnt1O88346 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tnnt1O88346 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.79■□□□□ 0.6
Tnnt1O88346 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.79■□□□□ 0.6
Tnnt1O88346 Gm18766-201ENSMUST00000189811 808 ntBASIC18.79■□□□□ 0.6
Tnnt1O88346 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC18.79■□□□□ 0.6
Tnnt1O88346 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tnnt1O88346 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.79■□□□□ 0.6
Tnnt1O88346 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tnnt1O88346 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.79■□□□□ 0.6
Tnnt1O88346 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tnnt1O88346 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tnnt1O88346 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnnt1O88346 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnnt1O88346 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnnt1O88346 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms