Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.35■□□□□ 0.05
Ttc3O88196 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ttc3O88196 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.34■□□□□ 0.05
Ttc3O88196 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.34■□□□□ 0.05
Ttc3O88196 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ttc3O88196 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ttc3O88196 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.34■□□□□ 0.05
Ttc3O88196 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Gm6912-201ENSMUST00000117218 544 ntBASIC15.34■□□□□ 0.05
Ttc3O88196 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.34■□□□□ 0.05
Ttc3O88196 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ttc3O88196 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ttc3O88196 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ttc3O88196 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ttc3O88196 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.33■□□□□ 0.05
Ttc3O88196 Gm15321-201ENSMUST00000121290 288 ntBASIC15.33■□□□□ 0.05
Ttc3O88196 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ttc3O88196 Gm9522-201ENSMUST00000182394 926 ntBASIC15.33■□□□□ 0.05
Ttc3O88196 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ttc3O88196 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ttc3O88196 Gm45453-201ENSMUST00000211758 853 ntBASIC15.33■□□□□ 0.05
Ttc3O88196 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Ttc3O88196 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Ttc3O88196 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ttc3O88196 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.33■□□□□ 0.04
Ttc3O88196 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.33■□□□□ 0.04
Ttc3O88196 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.33■□□□□ 0.04
Ttc3O88196 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.33■□□□□ 0.04
Ttc3O88196 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ttc3O88196 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ttc3O88196 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ttc3O88196 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.33■□□□□ 0.04
Ttc3O88196 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ttc3O88196 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ttc3O88196 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ttc3O88196 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ttc3O88196 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Gm12490-201ENSMUST00000120255 560 ntBASIC15.32■□□□□ 0.04
Ttc3O88196 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.32■□□□□ 0.04
Ttc3O88196 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ttc3O88196 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ttc3O88196 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ttc3O88196 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ttc3O88196 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Ttc3O88196 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.31■□□□□ 0.04
Ttc3O88196 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.31■□□□□ 0.04
Ttc3O88196 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.31■□□□□ 0.04
Ttc3O88196 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.31■□□□□ 0.04
Ttc3O88196 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ttc3O88196 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Ttc3O88196 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ttc3O88196 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Ttc3O88196 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms