Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.54□□□□□ -0.08
Pdlim1O70400 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim1O70400 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim1O70400 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Gm13365-201ENSMUST00000121188 973 ntBASIC14.53□□□□□ -0.08
Pdlim1O70400 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Gm18889-201ENSMUST00000174284 929 ntBASIC14.53□□□□□ -0.08
Pdlim1O70400 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.53□□□□□ -0.08
Pdlim1O70400 Chchd1-203ENSMUST00000224633 557 ntBASIC14.53□□□□□ -0.08
Pdlim1O70400 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.53□□□□□ -0.08
Pdlim1O70400 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdlim1O70400 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Pdlim1O70400 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim1O70400 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim1O70400 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.52□□□□□ -0.08
Pdlim1O70400 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim1O70400 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Pdlim1O70400 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim1O70400 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim1O70400 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim1O70400 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim1O70400 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Pdlim1O70400 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim1O70400 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Pdlim1O70400 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdlim1O70400 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Pdlim1O70400 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.52□□□□□ -0.09
Pdlim1O70400 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.52□□□□□ -0.09
Pdlim1O70400 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.52□□□□□ -0.09
Pdlim1O70400 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.52□□□□□ -0.09
Pdlim1O70400 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.52□□□□□ -0.09
Pdlim1O70400 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Pdlim1O70400 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pdlim1O70400 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.52□□□□□ -0.09
Pdlim1O70400 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pdlim1O70400 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pdlim1O70400 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Pdlim1O70400 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdlim1O70400 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim1O70400 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim1O70400 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms