Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgceO70258 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgceO70258 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgceO70258 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgceO70258 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgceO70258 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgceO70258 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.19□□□□□ -0.3
SgceO70258 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.19□□□□□ -0.3
SgceO70258 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SgceO70258 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.19□□□□□ -0.3
SgceO70258 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SgceO70258 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SgceO70258 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.19□□□□□ -0.3
SgceO70258 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.19□□□□□ -0.3
SgceO70258 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SgceO70258 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.19□□□□□ -0.3
SgceO70258 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
SgceO70258 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.19□□□□□ -0.3
SgceO70258 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SgceO70258 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.18□□□□□ -0.3
SgceO70258 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.18□□□□□ -0.3
SgceO70258 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SgceO70258 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.18□□□□□ -0.3
SgceO70258 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.18□□□□□ -0.3
SgceO70258 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.18□□□□□ -0.3
SgceO70258 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.18□□□□□ -0.3
SgceO70258 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.18□□□□□ -0.3
SgceO70258 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SgceO70258 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.18□□□□□ -0.3
SgceO70258 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SgceO70258 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SgceO70258 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgceO70258 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgceO70258 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgceO70258 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgceO70258 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.17□□□□□ -0.3
SgceO70258 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SgceO70258 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgceO70258 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgceO70258 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgceO70258 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgceO70258 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SgceO70258 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SgceO70258 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SgceO70258 Gm27300-201ENSMUST00000184085 97 ntBASIC13.17□□□□□ -0.3
SgceO70258 Gm27335-201ENSMUST00000184758 97 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms