Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.68□□□□□ -0.22
BckdkO55028 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.68□□□□□ -0.22
BckdkO55028 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.68□□□□□ -0.22
BckdkO55028 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.68□□□□□ -0.22
BckdkO55028 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Gm27301-201ENSMUST00000184012 127 ntBASIC13.68□□□□□ -0.22
BckdkO55028 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Gm44492-201ENSMUST00000197012 141 ntBASIC13.68□□□□□ -0.22
BckdkO55028 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.68□□□□□ -0.22
BckdkO55028 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
BckdkO55028 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
BckdkO55028 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
BckdkO55028 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
BckdkO55028 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.67□□□□□ -0.22
BckdkO55028 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
BckdkO55028 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.67□□□□□ -0.22
BckdkO55028 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
BckdkO55028 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.67□□□□□ -0.22
BckdkO55028 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
BckdkO55028 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.67□□□□□ -0.22
BckdkO55028 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
BckdkO55028 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
BckdkO55028 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
BckdkO55028 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
BckdkO55028 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
BckdkO55028 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
BckdkO55028 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
BckdkO55028 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
BckdkO55028 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
BckdkO55028 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
BckdkO55028 Chchd1-203ENSMUST00000224633 557 ntBASIC13.66□□□□□ -0.22
BckdkO55028 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
BckdkO55028 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.66□□□□□ -0.22
BckdkO55028 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.66□□□□□ -0.22
BckdkO55028 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
BckdkO55028 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BckdkO55028 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BckdkO55028 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BckdkO55028 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BckdkO55028 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
BckdkO55028 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
BckdkO55028 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BckdkO55028 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
BckdkO55028 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
BckdkO55028 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
BckdkO55028 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
BckdkO55028 Gm13597-201ENSMUST00000121239 375 ntBASIC13.65□□□□□ -0.22
BckdkO55028 Mir1895-201ENSMUST00000122615 79 ntBASIC13.65□□□□□ -0.22
BckdkO55028 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.65□□□□□ -0.22
BckdkO55028 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.65□□□□□ -0.22
BckdkO55028 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms