Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.2■□□□□ 0.18
Prom1O54990 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prom1O54990 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.2■□□□□ 0.18
Prom1O54990 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.19■□□□□ 0.18
Prom1O54990 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Prom1O54990 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.19■□□□□ 0.18
Prom1O54990 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Prom1O54990 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.19■□□□□ 0.18
Prom1O54990 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prom1O54990 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Prom1O54990 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Prom1O54990 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.18■□□□□ 0.18
Prom1O54990 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Prom1O54990 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prom1O54990 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Gm22189-201ENSMUST00000103822 86 ntBASIC16.18■□□□□ 0.18
Prom1O54990 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Gm6745-201ENSMUST00000199216 526 ntBASIC16.18■□□□□ 0.18
Prom1O54990 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.18■□□□□ 0.18
Prom1O54990 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prom1O54990 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Gm6180-201ENSMUST00000065243 498 ntBASIC16.18■□□□□ 0.18
Prom1O54990 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prom1O54990 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prom1O54990 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prom1O54990 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.17■□□□□ 0.18
Prom1O54990 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.17■□□□□ 0.18
Prom1O54990 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Prom1O54990 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prom1O54990 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.17■□□□□ 0.18
Prom1O54990 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Prom1O54990 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.17■□□□□ 0.18
Prom1O54990 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prom1O54990 Gm14127-201ENSMUST00000117906 678 ntBASIC16.17■□□□□ 0.18
Prom1O54990 Gm9726-201ENSMUST00000180321 678 ntBASIC16.17■□□□□ 0.18
Prom1O54990 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.17■□□□□ 0.18
Prom1O54990 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.17■□□□□ 0.18
Prom1O54990 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.17■□□□□ 0.18
Prom1O54990 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.17■□□□□ 0.18
Prom1O54990 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Prom1O54990 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prom1O54990 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prom1O54990 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prom1O54990 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Prom1O54990 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.17■□□□□ 0.18
Prom1O54990 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.17■□□□□ 0.18
Prom1O54990 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.17■□□□□ 0.18
Prom1O54990 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prom1O54990 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prom1O54990 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prom1O54990 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Prom1O54990 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prom1O54990 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prom1O54990 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prom1O54990 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prom1O54990 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prom1O54990 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Prom1O54990 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Prom1O54990 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prom1O54990 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.16■□□□□ 0.18
Prom1O54990 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prom1O54990 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.16■□□□□ 0.18
Prom1O54990 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.16■□□□□ 0.18
Prom1O54990 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prom1O54990 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prom1O54990 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prom1O54990 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.16■□□□□ 0.18
Prom1O54990 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms