Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nr1i3O35627 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nr1i3O35627 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nr1i3O35627 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nr1i3O35627 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.13
Nr1i3O35627 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nr1i3O35627 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nr1i3O35627 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.83■□□□□ 0.13
Nr1i3O35627 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Nr1i3O35627 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.83■□□□□ 0.12
Nr1i3O35627 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.83■□□□□ 0.12
Nr1i3O35627 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nr1i3O35627 Mir5126-201ENSMUST00000175513 77 ntBASIC15.83■□□□□ 0.12
Nr1i3O35627 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nr1i3O35627 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.83■□□□□ 0.12
Nr1i3O35627 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.83■□□□□ 0.12
Nr1i3O35627 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.83■□□□□ 0.12
Nr1i3O35627 Gm2451-201ENSMUST00000199447 999 ntBASIC15.83■□□□□ 0.12
Nr1i3O35627 Gm10290-201ENSMUST00000200451 999 ntBASIC15.83■□□□□ 0.12
Nr1i3O35627 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Gm15590-201ENSMUST00000078419 552 ntBASIC15.83■□□□□ 0.12
Nr1i3O35627 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Nr1i3O35627 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.83■□□□□ 0.12
Nr1i3O35627 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nr1i3O35627 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Nr1i3O35627 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.82■□□□□ 0.12
Nr1i3O35627 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Nr1i3O35627 Gm14042-201ENSMUST00000120139 833 ntBASIC15.82■□□□□ 0.12
Nr1i3O35627 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.82■□□□□ 0.12
Nr1i3O35627 Gm16026-204ENSMUST00000162652 683 ntBASIC15.82■□□□□ 0.12
Nr1i3O35627 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.82■□□□□ 0.12
Nr1i3O35627 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nr1i3O35627 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nr1i3O35627 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Nr1i3O35627 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.81■□□□□ 0.12
Nr1i3O35627 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.81■□□□□ 0.12
Nr1i3O35627 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Gm18195-201ENSMUST00000207604 706 ntBASIC15.81■□□□□ 0.12
Nr1i3O35627 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.81■□□□□ 0.12
Nr1i3O35627 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nr1i3O35627 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nr1i3O35627 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Nr1i3O35627 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.81■□□□□ 0.12
Nr1i3O35627 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.8■□□□□ 0.12
Nr1i3O35627 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nr1i3O35627 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms