Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Clcn6O35454 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Clcn6O35454 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Clcn6O35454 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Clcn6O35454 Gm9103-201ENSMUST00000119371 405 ntBASIC16.11■□□□□ 0.17
Clcn6O35454 Gm15166-201ENSMUST00000120790 385 ntBASIC16.11■□□□□ 0.17
Clcn6O35454 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Clcn6O35454 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Clcn6O35454 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Clcn6O35454 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Clcn6O35454 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Clcn6O35454 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC16.11■□□□□ 0.17
Clcn6O35454 Gm42612-201ENSMUST00000197986 623 ntBASIC16.11■□□□□ 0.17
Clcn6O35454 Gm18330-201ENSMUST00000199246 547 ntBASIC16.11■□□□□ 0.17
Clcn6O35454 Gm45401-201ENSMUST00000209456 733 ntBASIC16.11■□□□□ 0.17
Clcn6O35454 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC16.11■□□□□ 0.17
Clcn6O35454 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Clcn6O35454 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.11■□□□□ 0.17
Clcn6O35454 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.11■□□□□ 0.17
Clcn6O35454 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clcn6O35454 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Clcn6O35454 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC16.1■□□□□ 0.17
Clcn6O35454 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Clcn6O35454 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Clcn6O35454 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Clcn6O35454 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
Clcn6O35454 Gm9023-201ENSMUST00000198408 1038 ntBASIC16.1■□□□□ 0.17
Clcn6O35454 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC16.1■□□□□ 0.17
Clcn6O35454 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC16.1■□□□□ 0.17
Clcn6O35454 AC123062.1-201ENSMUST00000221287 481 ntBASIC16.1■□□□□ 0.17
Clcn6O35454 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clcn6O35454 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Clcn6O35454 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.09■□□□□ 0.17
Clcn6O35454 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Clcn6O35454 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
Clcn6O35454 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.09■□□□□ 0.17
Clcn6O35454 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Gm13678-201ENSMUST00000118926 340 ntBASIC16.09■□□□□ 0.17
Clcn6O35454 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.09■□□□□ 0.17
Clcn6O35454 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Clcn6O35454 Gm43104-201ENSMUST00000197234 311 ntBASIC16.09■□□□□ 0.17
Clcn6O35454 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.09■□□□□ 0.17
Clcn6O35454 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC16.09■□□□□ 0.17
Clcn6O35454 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Clcn6O35454 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Clcn6O35454 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Mdga2-212ENSMUST00000222987 1388 ntTSL 5 BASIC16.09■□□□□ 0.17
Clcn6O35454 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.09■□□□□ 0.17
Clcn6O35454 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Clcn6O35454 Gm45832-201ENSMUST00000212762 1443 ntBASIC16.09■□□□□ 0.17
Clcn6O35454 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Clcn6O35454 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Olfr700-202ENSMUST00000214840 1505 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Clcn6O35454 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Clcn6O35454 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Clcn6O35454 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
Clcn6O35454 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Clcn6O35454 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Clcn6O35454 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.08■□□□□ 0.17
Clcn6O35454 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Clcn6O35454 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.08■□□□□ 0.17
Clcn6O35454 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms