Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfsf11O35235 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.51□□□□□ -0.57
Tnfsf11O35235 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.51□□□□□ -0.57
Tnfsf11O35235 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Grk6-207ENSMUST00000225925 2769 ntBASIC11.51□□□□□ -0.57
Tnfsf11O35235 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.51□□□□□ -0.57
Tnfsf11O35235 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfsf11O35235 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.5□□□□□ -0.57
Tnfsf11O35235 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.5□□□□□ -0.57
Tnfsf11O35235 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.5□□□□□ -0.57
Tnfsf11O35235 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf11O35235 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.49□□□□□ -0.57
Tnfsf11O35235 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.49□□□□□ -0.57
Tnfsf11O35235 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.49□□□□□ -0.57
Tnfsf11O35235 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tnfsf11O35235 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.48□□□□□ -0.57
Tnfsf11O35235 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms