Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.7■□□□□ 0.58
Col15a1O35206 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Col15a1O35206 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC18.7■□□□□ 0.58
Col15a1O35206 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col15a1O35206 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Col15a1O35206 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.7■□□□□ 0.58
Col15a1O35206 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 Gm5279-201ENSMUST00000199575 745 ntBASIC18.69■□□□□ 0.58
Col15a1O35206 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.69■□□□□ 0.58
Col15a1O35206 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Col15a1O35206 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Col15a1O35206 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Col15a1O35206 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col15a1O35206 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col15a1O35206 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col15a1O35206 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.68■□□□□ 0.58
Col15a1O35206 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.68■□□□□ 0.58
Col15a1O35206 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Col15a1O35206 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col15a1O35206 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.68■□□□□ 0.58
Col15a1O35206 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Col15a1O35206 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Col15a1O35206 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Gm12882-201ENSMUST00000121696 517 ntBASIC18.68■□□□□ 0.58
Col15a1O35206 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.68■□□□□ 0.58
Col15a1O35206 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.68■□□□□ 0.58
Col15a1O35206 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.68■□□□□ 0.58
Col15a1O35206 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col15a1O35206 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col15a1O35206 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col15a1O35206 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col15a1O35206 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Col15a1O35206 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Col15a1O35206 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col15a1O35206 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col15a1O35206 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.67■□□□□ 0.58
Col15a1O35206 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col15a1O35206 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col15a1O35206 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.67■□□□□ 0.58
Col15a1O35206 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Col15a1O35206 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Col15a1O35206 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col15a1O35206 Gm9899-201ENSMUST00000065519 555 ntBASIC18.67■□□□□ 0.58
Col15a1O35206 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col15a1O35206 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col15a1O35206 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col15a1O35206 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col15a1O35206 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Col15a1O35206 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC18.66■□□□□ 0.58
Col15a1O35206 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.66■□□□□ 0.58
Col15a1O35206 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Col15a1O35206 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col15a1O35206 Gm15824-201ENSMUST00000119516 955 ntBASIC18.66■□□□□ 0.58
Col15a1O35206 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC18.66■□□□□ 0.58
Col15a1O35206 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Gm21470-201ENSMUST00000187680 696 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms