Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.32■□□□□ 0.04
Ebf3O08791 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf3O08791 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.31■□□□□ 0.04
Ebf3O08791 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ebf3O08791 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.31■□□□□ 0.04
Ebf3O08791 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.31■□□□□ 0.04
Ebf3O08791 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.31■□□□□ 0.04
Ebf3O08791 Gm6415-201ENSMUST00000118488 348 ntBASIC15.31■□□□□ 0.04
Ebf3O08791 Gm15483-201ENSMUST00000120338 456 ntBASIC15.31■□□□□ 0.04
Ebf3O08791 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
Ebf3O08791 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ebf3O08791 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ebf3O08791 Gm18737-201ENSMUST00000173594 937 ntBASIC15.31■□□□□ 0.04
Ebf3O08791 Mir6977-201ENSMUST00000184960 64 ntBASIC15.31■□□□□ 0.04
Ebf3O08791 Gm38225-201ENSMUST00000194001 393 ntBASIC15.31■□□□□ 0.04
Ebf3O08791 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.31■□□□□ 0.04
Ebf3O08791 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.31■□□□□ 0.04
Ebf3O08791 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ebf3O08791 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf3O08791 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ebf3O08791 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ebf3O08791 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.3■□□□□ 0.04
Ebf3O08791 Gm13223-201ENSMUST00000118609 747 ntBASIC15.3■□□□□ 0.04
Ebf3O08791 Gm12151-201ENSMUST00000121374 290 ntBASIC15.3■□□□□ 0.04
Ebf3O08791 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.3■□□□□ 0.04
Ebf3O08791 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Ebf3O08791 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ebf3O08791 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ebf3O08791 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ebf3O08791 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf3O08791 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.29■□□□□ 0.04
Ebf3O08791 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.29■□□□□ 0.04
Ebf3O08791 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.29■□□□□ 0.04
Ebf3O08791 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ebf3O08791 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.29■□□□□ 0.04
Ebf3O08791 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Ebf3O08791 Gm9824-201ENSMUST00000178707 561 ntBASIC15.29■□□□□ 0.04
Ebf3O08791 Gm27618-201ENSMUST00000183671 60 ntBASIC15.29■□□□□ 0.04
Ebf3O08791 Gm38294-201ENSMUST00000192831 381 ntBASIC15.29■□□□□ 0.04
Ebf3O08791 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.29■□□□□ 0.04
Ebf3O08791 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ebf3O08791 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ebf3O08791 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ebf3O08791 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.29■□□□□ 0.04
Ebf3O08791 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.28■□□□□ 0.04
Ebf3O08791 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.28■□□□□ 0.04
Ebf3O08791 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Ebf3O08791 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ebf3O08791 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms