Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Gm12134-201ENSMUST00000122109 520 ntBASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Mir3113-201ENSMUST00000175478 76 ntBASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Gm9726-201ENSMUST00000180321 678 ntBASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Gm27525-201ENSMUST00000184465 107 ntBASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13d-3J3QMG8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Gm15467-201ENSMUST00000120582 445 ntBASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Gm6443-201ENSMUST00000203599 874 ntBASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Trav13d-3J3QMG8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm23547-201ENSMUST00000158210 271 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm2451-201ENSMUST00000199447 999 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm10290-201ENSMUST00000200451 999 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13d-3J3QMG8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms