Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Gm45751-201ENSMUST00000210185 1573 ntBASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tubgcp6G5E8P0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Mup-ps23-201ENSMUST00000118063 630 ntBASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Gm37230-201ENSMUST00000194491 818 ntBASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tubgcp6G5E8P0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Gm37728-201ENSMUST00000195025 2292 ntBASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Gm18222-201ENSMUST00000202416 1387 ntBASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tubgcp6G5E8P0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tubgcp6G5E8P0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tubgcp6G5E8P0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Tubgcp6G5E8P0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Tubgcp6G5E8P0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Tubgcp6G5E8P0 Gm9816-201ENSMUST00000122292 1414 ntBASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tubgcp6G5E8P0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Gm27514-201ENSMUST00000183692 110 ntBASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Efs-202ENSMUST00000227037 2540 ntBASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Gm45667-201ENSMUST00000210380 1316 ntBASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Gm27572-201ENSMUST00000183702 255 ntBASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tubgcp6G5E8P0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms