Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Gm18624-201ENSMUST00000220966 658 ntBASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 BC001981-202ENSMUST00000191393 1545 ntBASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sh3tc1G3X9F6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc1G3X9F6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc1G3X9F6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc1G3X9F6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc1G3X9F6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.71■□□□□ 0.43
Sh3tc1G3X9F6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Sh3tc1G3X9F6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc1G3X9F6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc1G3X9F6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc1G3X9F6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sh3tc1G3X9F6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 Gm6916-202ENSMUST00000205523 195 ntBASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sh3tc1G3X9F6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sh3tc1G3X9F6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.69■□□□□ 0.42
Sh3tc1G3X9F6 Gm33320-201ENSMUST00000192232 530 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms