Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Gm28305F6U473 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Gm28305F6U473 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Gm28305F6U473 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm28305F6U473 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Gm10493-201ENSMUST00000097270 612 ntBASIC10.83□□□□□ -0.68
Gm28305F6U473 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gm28305F6U473 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.83□□□□□ -0.68
Gm28305F6U473 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.83□□□□□ -0.68
Gm28305F6U473 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gm28305F6U473 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Gm28305F6U473 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm28305F6U473 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.82□□□□□ -0.68
Gm28305F6U473 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm28305F6U473 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Gm28305F6U473 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC10.82□□□□□ -0.68
Gm28305F6U473 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Gm28305F6U473 Gm12085-201ENSMUST00000119263 940 ntBASIC10.82□□□□□ -0.68
Gm28305F6U473 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Gm42555-201ENSMUST00000199304 1039 ntBASIC10.82□□□□□ -0.68
Gm28305F6U473 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Gm44672-201ENSMUST00000206944 1098 ntBASIC10.82□□□□□ -0.68
Gm28305F6U473 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.82□□□□□ -0.68
Gm28305F6U473 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Gm28305F6U473 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC10.82□□□□□ -0.68
Gm28305F6U473 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Gm28305F6U473 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Gm28305F6U473 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Gm28305F6U473 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Gm28305F6U473 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.82□□□□□ -0.68
Gm28305F6U473 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gm28305F6U473 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Grk6-205ENSMUST00000224653 2976 ntBASIC10.81□□□□□ -0.68
Gm28305F6U473 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Gm28305F6U473 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm28305F6U473 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC10.81□□□□□ -0.68
Gm28305F6U473 Gm10033-202ENSMUST00000211874 928 ntBASIC10.81□□□□□ -0.68
Gm28305F6U473 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC10.81□□□□□ -0.68
Gm28305F6U473 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gm28305F6U473 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms