Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb9E9Q5G2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Gm15920-201ENSMUST00000118998 402 ntBASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb9E9Q5G2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Gm6415-201ENSMUST00000118488 348 ntBASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Gm22175-201ENSMUST00000175007 78 ntBASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Mir6956-201ENSMUST00000183598 62 ntBASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb9E9Q5G2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb9E9Q5G2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Gm13823-201ENSMUST00000119930 345 ntBASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb9E9Q5G2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms