Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col6a3E9PWQ3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Gm11331-201ENSMUST00000119764 288 ntBASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Gm25668-201ENSMUST00000157700 129 ntBASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col6a3E9PWQ3 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Gm6916-202ENSMUST00000205523 195 ntBASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 CT025551.1-201ENSMUST00000223996 692 ntBASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Gm9540-201ENSMUST00000188230 478 ntBASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col6a3E9PWQ3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Gm8213-201ENSMUST00000118191 441 ntBASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col6a3E9PWQ3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Gm27023-201ENSMUST00000182372 285 ntBASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Gm18212-201ENSMUST00000211678 889 ntBASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Gm14277-201ENSMUST00000121195 360 ntBASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Prob1-201ENSMUST00000097619 3021 ntBASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col6a3E9PWQ3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Gm23200-201ENSMUST00000104379 132 ntBASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col6a3E9PWQ3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms