Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm28043E0CXC2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm28043E0CXC2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Gm7222-201ENSMUST00000117512 906 ntBASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm28043E0CXC2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Gm10060-201ENSMUST00000212002 111 ntBASIC14.78□□□□□ -0.04
Gm28043E0CXC2 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Gm28043E0CXC2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms