Protein–RNA interactions for Protein: D3Z6P9

Ddx43, DEAD (Asp-Glu-Ala-Asp) box polypeptide 43, mousemouse

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx43D3Z6P9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx43D3Z6P9 Gm25287-201ENSMUST00000103846 110 ntBASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Gm22918-201ENSMUST00000103855 110 ntBASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Gm24158-201ENSMUST00000175263 71 ntBASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ddx43D3Z6P9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx43D3Z6P9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm22065-201ENSMUST00000103753 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm22066-201ENSMUST00000103761 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm24932-201ENSMUST00000103763 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm24115-201ENSMUST00000103799 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm22190-201ENSMUST00000103827 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm22191-201ENSMUST00000103831 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm24721-201ENSMUST00000103849 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm28018-201ENSMUST00000103869 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm26399-201ENSMUST00000103937 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm25349-201ENSMUST00000177728 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm23616-201ENSMUST00000177797 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm25871-201ENSMUST00000177816 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm24752-201ENSMUST00000178240 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm24496-201ENSMUST00000178287 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm25649-201ENSMUST00000178476 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm25548-201ENSMUST00000178681 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm23147-201ENSMUST00000178841 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm26095-201ENSMUST00000179270 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm22171-201ENSMUST00000179283 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm23936-201ENSMUST00000179354 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm22619-201ENSMUST00000179516 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm25255-201ENSMUST00000179579 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm24755-201ENSMUST00000179691 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm26506-201ENSMUST00000179692 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm25086-201ENSMUST00000179931 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm23243-201ENSMUST00000180047 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm24659-201ENSMUST00000180212 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm24169-201ENSMUST00000180244 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm23689-201ENSMUST00000180354 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm27359-201ENSMUST00000184153 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm27785-201ENSMUST00000184268 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm27466-201ENSMUST00000184396 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm27703-201ENSMUST00000184836 110 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Gm7774-201ENSMUST00000200064 533 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.75□□□□□ -0.05
Ddx43D3Z6P9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms