Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccnb1ip1D3Z3K2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccnb1ip1D3Z3K2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccnb1ip1D3Z3K2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm19164-201ENSMUST00000210667 640 ntBASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccnb1ip1D3Z3K2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm25406-201ENSMUST00000157599 105 ntBASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccnb1ip1D3Z3K2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Gm9987-201ENSMUST00000069768 567 ntBASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccnb1ip1D3Z3K2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms