Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Gm15920-201ENSMUST00000118998 402 ntBASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Gm13597-201ENSMUST00000121239 375 ntBASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Gm11025-201ENSMUST00000140773 466 ntBASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pnldc1B2RXZ1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Gm10576-201ENSMUST00000191927 825 ntBASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pnldc1B2RXZ1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Pnldc1B2RXZ1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Pnldc1B2RXZ1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pnldc1B2RXZ1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms