Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Gm11127A7VMS2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Gm11127A7VMS2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Gm11127A7VMS2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Gm11127A7VMS2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Gm11127A7VMS2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Gm11127A7VMS2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Gm4459-201ENSMUST00000118750 468 ntBASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Gm18622-201ENSMUST00000219361 595 ntBASIC13.07□□□□□ -0.32
Gm11127A7VMS2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Gm11127A7VMS2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Gm11127A7VMS2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms