Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Gm12203-201ENSMUST00000118235 598 ntBASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Gm12209-201ENSMUST00000120089 596 ntBASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Gm14267-206ENSMUST00000226870 1209 ntBASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Gm10702-201ENSMUST00000098929 1268 ntBASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shroom2A2ALU4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Gm8749-201ENSMUST00000117737 331 ntBASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Gm26927-201ENSMUST00000182385 965 ntBASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shroom2A2ALU4 Gm15371-201ENSMUST00000117057 784 ntBASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Gm37835-201ENSMUST00000193305 361 ntBASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC22.73■■□□□ 1.23
Shroom2A2ALU4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Gm11439-201ENSMUST00000118598 409 ntBASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Gm10109-202ENSMUST00000206890 1211 ntBASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC22.72■■□□□ 1.23
Shroom2A2ALU4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Gm14017-201ENSMUST00000121934 386 ntBASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Shroom2A2ALU4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC22.71■■□□□ 1.23
Shroom2A2ALU4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Shroom2A2ALU4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Shroom2A2ALU4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shroom2A2ALU4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shroom2A2ALU4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC22.7■■□□□ 1.22
Shroom2A2ALU4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC22.7■■□□□ 1.22
Shroom2A2ALU4 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC22.7■■□□□ 1.22
Shroom2A2ALU4 Gm7046-201ENSMUST00000221351 977 ntBASIC22.7■■□□□ 1.22
Shroom2A2ALU4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shroom2A2ALU4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Shroom2A2ALU4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shroom2A2ALU4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC22.69■■□□□ 1.22
Shroom2A2ALU4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Shroom2A2ALU4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shroom2A2ALU4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shroom2A2ALU4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shroom2A2ALU4 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC22.69■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms