Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav12-1A0N8R1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav12-1A0N8R1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12-1A0N8R1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms