Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cfap99A0A140LIX9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.63■□□□□ 0.41
Cfap99A0A140LIX9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Mir6977-201ENSMUST00000184960 64 ntBASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.62■□□□□ 0.41
Cfap99A0A140LIX9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cfap99A0A140LIX9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Gm5779-201ENSMUST00000218467 910 ntBASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap99A0A140LIX9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap99A0A140LIX9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms