Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Gm27301-201ENSMUST00000184012 127 ntBASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Thap2-203ENSMUST00000218989 527 ntBASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13n-1A0A0G2JEU8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.71□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm12008-201ENSMUST00000117791 755 ntBASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm17968-201ENSMUST00000194902 784 ntBASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms