Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mir770-201ENSMUST00000103252 94 ntBASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.17□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm6623-201ENSMUST00000173570 544 ntBASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm45328-201ENSMUST00000210942 917 ntBASIC11.16□□□□□ -0.62
Trav3n-3A0A0G2JEM0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms