Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6d-5A0A075B6B9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6d-5A0A075B6B9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Trav6d-5A0A075B6B9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav6d-5A0A075B6B9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm15565-201ENSMUST00000118890 427 ntBASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav6d-5A0A075B6B9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm25016-201ENSMUST00000158399 131 ntBASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav6d-5A0A075B6B9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm8097-201ENSMUST00000117903 829 ntBASIC11.87□□□□□ -0.51
Trav6d-5A0A075B6B9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms