Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6-5A0A075B6B5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Trav6-5A0A075B6B5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6-5A0A075B6B5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6-5A0A075B6B5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6-5A0A075B6B5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.4□□□□□ -0.59
Trav6-5A0A075B6B5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.4□□□□□ -0.59
Trav6-5A0A075B6B5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Gm13559-201ENSMUST00000120476 863 ntBASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Gm8520-201ENSMUST00000186517 868 ntBASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Gm18622-201ENSMUST00000219361 595 ntBASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Matn2-206ENSMUST00000228570 2798 ntBASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav6-5A0A075B6B5 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav6-5A0A075B6B5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms