Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8n-2A0A075B633 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav8n-2A0A075B633 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8n-2A0A075B633 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8n-2A0A075B633 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Gm12091-201ENSMUST00000146791 830 ntBASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Gm2451-201ENSMUST00000199447 999 ntBASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Gm10290-201ENSMUST00000200451 999 ntBASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav8n-2A0A075B633 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Gm15823-201ENSMUST00000064305 670 ntBASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Gm6180-201ENSMUST00000065243 498 ntBASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav8n-2A0A075B633 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Gm9522-201ENSMUST00000182394 926 ntBASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Gm42612-201ENSMUST00000197986 623 ntBASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Gm43170-201ENSMUST00000199827 612 ntBASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.43□□□□□ -0.26
Trav8n-2A0A075B633 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms