Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav6-1A0A075B5Z8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6-1A0A075B5Z8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm4535-201ENSMUST00000182274 558 ntBASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm37153-201ENSMUST00000193637 231 ntBASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm9682-201ENSMUST00000197505 556 ntBASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm10355-201ENSMUST00000097146 517 ntBASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav6-1A0A075B5Z8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-1A0A075B5Z8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms