Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav5-1A0A075B5Z7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav5-1A0A075B5Z7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav5-1A0A075B5Z7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav5-1A0A075B5Z7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Mir6956-201ENSMUST00000183598 62 ntBASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav5-1A0A075B5Z7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav5-1A0A075B5Z7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav5-1A0A075B5Z7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms