Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Gm16026-204ENSMUST00000162652 683 ntBASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Gm5177-201ENSMUST00000183092 997 ntBASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.75□□□□□ -0.05
H2afb2S4R1M3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2afb2S4R1M3 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Gm5364-201ENSMUST00000216789 889 ntBASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
H2afb2S4R1M3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Gm8749-201ENSMUST00000117737 331 ntBASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Gm9727-201ENSMUST00000161387 555 ntBASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Gm9726-201ENSMUST00000180321 678 ntBASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms