Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn9Q9Z0S7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn9Q9Z0S7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn9Q9Z0S7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Gm23547-201ENSMUST00000158210 271 ntBASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Gm7461-201ENSMUST00000058918 827 ntBASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn9Q9Z0S7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Gm8749-201ENSMUST00000117737 331 ntBASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Gm14140-201ENSMUST00000119999 995 ntBASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.17□□□□□ -0.14
Cldn9Q9Z0S7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms