Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn13Q9Z0S4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Gm17968-201ENSMUST00000194902 784 ntBASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Carlr-201ENSMUST00000181515 2574 ntBASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn13Q9Z0S4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Cldn13Q9Z0S4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn13Q9Z0S4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms