Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 BC037039-201ENSMUST00000192003 2205 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm24543-201ENSMUST00000103867 82 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm27533-201ENSMUST00000183800 152 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm29310-201ENSMUST00000185468 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21825-201ENSMUST00000185728 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm29109-201ENSMUST00000185895 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21896-201ENSMUST00000186520 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21873-201ENSMUST00000186728 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21794-201ENSMUST00000187056 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21880-201ENSMUST00000187275 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21826-201ENSMUST00000187451 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21198-201ENSMUST00000188393 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21749-201ENSMUST00000189343 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21901-201ENSMUST00000189568 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm29424-201ENSMUST00000189716 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm28599-201ENSMUST00000189838 694 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21867-201ENSMUST00000189917 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm29269-201ENSMUST00000190087 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21722-201ENSMUST00000190153 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm28423-201ENSMUST00000190701 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21899-201ENSMUST00000190745 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21910-201ENSMUST00000191163 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21849-201ENSMUST00000191571 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm28678-201ENSMUST00000191593 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm20910-201ENSMUST00000193268 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Gm21871-201ENSMUST00000194621 696 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.27■□□□□ 0.04
Smarcb1Q9Z0H3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcb1Q9Z0H3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Gm37230-201ENSMUST00000194491 818 ntBASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcb1Q9Z0H3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcb1Q9Z0H3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms