Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Lhx9Q9WUH2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.02□□□□□ -0.16
Lhx9Q9WUH2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.02□□□□□ -0.17
Lhx9Q9WUH2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Gm11543-201ENSMUST00000120758 370 ntBASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Gm18737-201ENSMUST00000173594 937 ntBASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx9Q9WUH2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Trav13-3-201ENSMUST00000117226 336 ntBASIC14□□□□□ -0.17
Lhx9Q9WUH2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lhx9Q9WUH2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Tcf21-202ENSMUST00000218002 1788 ntBASIC14□□□□□ -0.17
Lhx9Q9WUH2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lhx9Q9WUH2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms