Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClcnkaQ9WUB7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Gm18206-201ENSMUST00000207027 926 ntBASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClcnkaQ9WUB7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Gm12008-201ENSMUST00000117791 755 ntBASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Gm13597-201ENSMUST00000121239 375 ntBASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClcnkaQ9WUB7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
ClcnkaQ9WUB7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
ClcnkaQ9WUB7 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.58□□□□□ -0.23
ClcnkaQ9WUB7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.58□□□□□ -0.24
ClcnkaQ9WUB7 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms