Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.49□□□□□ -0.57
CcsQ9WU84 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.49□□□□□ -0.57
CcsQ9WU84 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.49□□□□□ -0.57
CcsQ9WU84 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.49□□□□□ -0.57
CcsQ9WU84 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.48□□□□□ -0.57
CcsQ9WU84 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Gm7153-201ENSMUST00000117092 455 ntBASIC11.48□□□□□ -0.57
CcsQ9WU84 Gm13312-201ENSMUST00000119631 718 ntBASIC11.48□□□□□ -0.57
CcsQ9WU84 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.48□□□□□ -0.57
CcsQ9WU84 Gm15372-201ENSMUST00000120729 834 ntBASIC11.48□□□□□ -0.57
CcsQ9WU84 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CcsQ9WU84 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CcsQ9WU84 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CcsQ9WU84 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
CcsQ9WU84 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms