Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Gm21559-201ENSMUST00000220638 855 ntBASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Gm9987-201ENSMUST00000069768 567 ntBASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Gm8587-201ENSMUST00000076538 843 ntBASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pfdn5Q9WU28 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Gm7367-201ENSMUST00000057611 492 ntBASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Pfdn5Q9WU28 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pfdn5Q9WU28 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pfdn5Q9WU28 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms