Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf3Q9QXK7 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf3Q9QXK7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cpsf3Q9QXK7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm22065-201ENSMUST00000103753 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm22066-201ENSMUST00000103761 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm24932-201ENSMUST00000103763 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm24115-201ENSMUST00000103799 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm22190-201ENSMUST00000103827 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm22191-201ENSMUST00000103831 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm24721-201ENSMUST00000103849 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm28018-201ENSMUST00000103869 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm26399-201ENSMUST00000103937 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm25349-201ENSMUST00000177728 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm23616-201ENSMUST00000177797 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm25871-201ENSMUST00000177816 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm24752-201ENSMUST00000178240 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm24496-201ENSMUST00000178287 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm25649-201ENSMUST00000178476 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm25548-201ENSMUST00000178681 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm23147-201ENSMUST00000178841 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm26095-201ENSMUST00000179270 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm22171-201ENSMUST00000179283 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm23936-201ENSMUST00000179354 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm22619-201ENSMUST00000179516 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm25255-201ENSMUST00000179579 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm24755-201ENSMUST00000179691 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm26506-201ENSMUST00000179692 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm25086-201ENSMUST00000179931 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm23243-201ENSMUST00000180047 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm24659-201ENSMUST00000180212 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm24169-201ENSMUST00000180244 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm23689-201ENSMUST00000180354 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm27359-201ENSMUST00000184153 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm27785-201ENSMUST00000184268 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm27466-201ENSMUST00000184396 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Gm27703-201ENSMUST00000184836 110 ntBASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cpsf3Q9QXK7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.84■□□□□ 0.13
Cpsf3Q9QXK7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpsf3Q9QXK7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cpsf3Q9QXK7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpsf3Q9QXK7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cpsf3Q9QXK7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf3Q9QXK7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf3Q9QXK7 Efs-202ENSMUST00000227037 2540 ntBASIC15.83■□□□□ 0.12
Cpsf3Q9QXK7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cpsf3Q9QXK7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf3Q9QXK7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf3Q9QXK7 Gm38225-201ENSMUST00000194001 393 ntBASIC15.83■□□□□ 0.12
Cpsf3Q9QXK7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf3Q9QXK7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.83■□□□□ 0.12
Cpsf3Q9QXK7 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.83■□□□□ 0.12
Cpsf3Q9QXK7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpsf3Q9QXK7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms