Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Crlf1Q9JM58 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Gm5354-201ENSMUST00000182417 973 ntBASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.78□□□□□ -0.52
Crlf1Q9JM58 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Olfr582-201ENSMUST00000098212 960 ntBASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Crlf1Q9JM58 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Crlf1Q9JM58 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Crlf1Q9JM58 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Crlf1Q9JM58 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Crlf1Q9JM58 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Crlf1Q9JM58 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Crlf1Q9JM58 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Crlf1Q9JM58 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Gm15198-201ENSMUST00000117283 177 ntBASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Gm8062-201ENSMUST00000139696 444 ntBASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Crlf1Q9JM58 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Crlf1Q9JM58 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Crlf1Q9JM58 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Crlf1Q9JM58 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Crlf1Q9JM58 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Crlf1Q9JM58 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Crlf1Q9JM58 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Crlf1Q9JM58 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.76□□□□□ -0.53
Crlf1Q9JM58 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Crlf1Q9JM58 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Crlf1Q9JM58 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Crlf1Q9JM58 Gm13226-201ENSMUST00000117838 404 ntBASIC11.76□□□□□ -0.53
Crlf1Q9JM58 Gm12341-201ENSMUST00000119724 503 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms