Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.26□□□□□ -0.29
Trem1Q9JKE2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.26□□□□□ -0.29
Trem1Q9JKE2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trem1Q9JKE2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Gm27463-201ENSMUST00000183569 57 ntBASIC13.24□□□□□ -0.29
Trem1Q9JKE2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.24□□□□□ -0.29
Trem1Q9JKE2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem1Q9JKE2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms