Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ube3bQ9ES34 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Gm5566-201ENSMUST00000116118 459 ntBASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Gm27622-201ENSMUST00000183779 60 ntBASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ube3bQ9ES34 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Ube3bQ9ES34 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Gm10576-201ENSMUST00000191927 825 ntBASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ube3bQ9ES34 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Gm8410-201ENSMUST00000117225 605 ntBASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Gm13223-201ENSMUST00000118609 747 ntBASIC17.47■□□□□ 0.39
Ube3bQ9ES34 Gm9719-201ENSMUST00000162765 543 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms