Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Gm10231-201ENSMUST00000181584 441 ntBASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Gm10175-202ENSMUST00000208752 441 ntBASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ube4bQ9ES00 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Gm9013-201ENSMUST00000132939 882 ntBASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube4bQ9ES00 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube4bQ9ES00 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ube4bQ9ES00 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube4bQ9ES00 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube4bQ9ES00 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.19□□□□□ -0.14
Ube4bQ9ES00 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube4bQ9ES00 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms