Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Gm16198-201ENSMUST00000118766 670 ntBASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.78□□□□□ -0.04
Vps35Q9EQH3 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps35Q9EQH3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps35Q9EQH3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Vps35Q9EQH3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps35Q9EQH3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps35Q9EQH3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps35Q9EQH3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Vps35Q9EQH3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Vps35Q9EQH3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps35Q9EQH3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vps35Q9EQH3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps35Q9EQH3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vps35Q9EQH3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Vps35Q9EQH3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Gm17271-201ENSMUST00000165535 355 ntBASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Gm10154-201ENSMUST00000084445 354 ntBASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps35Q9EQH3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps35Q9EQH3 Gm15427-201ENSMUST00000117288 531 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms