Protein–RNA interactions for Protein: Q9EPB8

Vmn1r54, Vomeronasal type-1 receptor 54, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r54Q9EPB8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Mir8098-201ENSMUST00000184011 137 ntBASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vmn1r54Q9EPB8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Gm27646-201ENSMUST00000183989 110 ntBASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Gm28659-201ENSMUST00000188013 759 ntBASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Gm6089-201ENSMUST00000197666 938 ntBASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmn1r54Q9EPB8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmn1r54Q9EPB8 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmn1r54Q9EPB8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vmn1r54Q9EPB8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmn1r54Q9EPB8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.02□□□□□ -0.48
Vmn1r54Q9EPB8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Vmn1r54Q9EPB8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Vmn1r54Q9EPB8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmn1r54Q9EPB8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms