Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnft1Q9DCN7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnft1Q9DCN7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnft1Q9DCN7 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.45□□□□□ -0.1
Rnft1Q9DCN7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Rnft1Q9DCN7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnft1Q9DCN7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rnft1Q9DCN7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Gm37153-201ENSMUST00000193637 231 ntBASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Gm9682-201ENSMUST00000197505 556 ntBASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rnft1Q9DCN7 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rnft1Q9DCN7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Gm17807-201ENSMUST00000186869 298 ntBASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnft1Q9DCN7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms