Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ssmem1Q9D9Y8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssmem1Q9D9Y8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Mir6990-201ENSMUST00000183724 91 ntBASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ssmem1Q9D9Y8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ssmem1Q9D9Y8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms